Prof. Dr. Sebastian Böcker

Sebastian Böcker Sebastian Böcker Image: Sebastian Böcker


Faculty of Mathematics and Computer Science
Friedrich Schiller University Jena
Ernst-Abbe-Platz 2a
07743 Jena
Phone: +49 3641 9 46 451
Fax:      +49 3641 9 46 202


  • Chair holder for bioinformatics


  • Bioinformatics
  • Algorithmic mass spectrometry
  • Algorithmics

Publications (the 5 most important)

  1. Florian Rasche, Aleš Svatoš, Ravi Kumar Maddula, Christoph Böttcher, and Sebastian Böcker. Computing fragmentation trees from tandem mass spectrometry data. Anal. Chem., 83:1243-1251, 2011.
  2. Tobias Wittkop, Dorothea Emig, Sita Lange, Sven Rahmann, Mario Albrecht, John H. Morris, Sebastian Böcker, Jens Stoye, and Jan Baumbach. Partitioning biological data with transitivity clustering. Nat. Methods, 7(6):419-420, 2010.
  3. Sebastian Böcker, Sebastian Briesemeister, and Gunnar W. Klau. Exact algorithms for cluster editing: Evaluation and experiments. Algorithmica, 60(2):316-334, 2011.
  4. Anja Baumgaertel, Kerstin Scheubert, Bernhard Pietsch, Kristian Kempe, Anna C. Crecelius, Sebastian Böcker, and Ulrich S. Schubert. Analysis of different synthetic homopolymers by the use of a new calculation software for tandem mass spectra. Rapid Commun. Mass Spectrom., 25(12):1765-1778, 2011.
  5. Kerstin Scheubert, Franziska Hufsky, Florian Rasche, and Sebastian Böcker. Computing fragmentation trees from metabolite multiple mass spectrometry data. In Proc. of Research in Computational Molecular Biology (RECOMB 2011), volume 6577 of Lect. Notes Comput. Sci., pages 377-391. Springer, 2011.
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