Prof. Dr. Sebastian Böcker

Sebastian Böcker
Sebastian Böcker
Image: Sebastian Böcker

 

Faculty of Mathematics and Computer Science
Friedrich Schiller University Jena
Ernst-Abbe-Platz 2a
07743 Jena
Phone: +49 3641 9 46 451
Fax:      +49 3641 9 46 202
sebastian.boecker@uni-jena.de
HomepageExternal link

Functions

  • Chair holder for bioinformatics

Research

  • Bioinformatics
  • Algorithmic mass spectrometry
  • Algorithmics

Publications (selected 5 most recent)

  1. Robin Schmid, Steffen Heuckeroth, Ansgar Korf, Aleksandr Smirnov, Owen Myers, Thomas S. Dyrlund, Roman Bushuiev, Kevin J. Murray, Nils Hoffmann, Miaoshan Lu, Abinesh Sarvepalli, Zheng Zhang, Markus Fleischauer, Kai Dührkop, Mark Wesner, Shawn J. Hoogstra, Edward Rudt, Olena Mokshyna, Corinna Brungs, Kirill Ponomarov, Lana Mutabdžija, Tito Damiani, Chris J. Pudney, Mark Earll, Patrick O. Helmer, Timothy R. Fallon, Tobias Schulze, Albert Rivas-Ubach, Aivett Bilbao, Henning Richter, Louis-Félix Nothias, Mingxun Wang, Matej Orešič, Jing-Ke Weng, Sebastian Böcker, Astrid Jeibmann, Heiko Hayen, Uwe Karst, Pieter C. Dorrestein, Daniel Petras, Xiuxia Du & Tomáš Pluskal. Integrative analysis of multimodal mass spectrometry data in MZmine 3. Nat Biotechnol 41, 447–449 (2023). https://doi.org/10.1038/s41587-023-01690-2External link
  2. Michael A. Stravs, Kai Dührkop, Sebastian Böcker & Nicola Zamboni. MSNovelist: de novo structure generation from mass spectra. Nat Methods 19, 865–870 (2022). https://doi.org/10.1038/s41592-022-01486-3External link
  3. Martin A. Hoffmann, Louis-Félix Nothias, Marcus Ludwig, Markus Fleischauer, Emily C. Gentry, Michael Witting, Pieter C. Dorrestein, Kai Dührkop & Sebastian Böcker. High-confidence structural annotation of metabolites absent from spectral libraries. Nat Biotechnol 40, 411–421 (2022). https://doi.org/10.1038/s41587-021-01045-9External link 
  4. Kai Dührkop, Louis-Félix Nothias, Markus Fleischauer, Raphael Reher, Marcus Ludwig, Martin A. Hoffmann, Daniel Petras, William H. Gerwick, Juho Rousu, Pieter C. Dorrestein & Sebastian Böcker. Systematic classification of unknown metabolites using high-resolution fragmentation mass spectra. Nat Biotechnol 39, 462–471 (2021).https://doi.org/10.1038/s41587-020-0740-8External link 
  5. Kai Dührkop, Markus Fleischauer, Marcus Ludwig, Alexander A. Aksenov, Alexey V. Melnik, Marvin Meusel, Pieter C. Dorrestein, Juho Rousu & Sebastian Böcker. SIRIUS 4: a rapid tool for turning tandem mass spectra into metabolite structure information. Nat Methods 16, 299–302 (2019). https://doi.org/10.1038/s41592-019-0344-8